Papers

Find the database of our publicly available data here.

Roo Vandegrift, Ashley C. Bateman, Kyla N. Siemens, May Nguyen, Jessica L. Green, Kevin G. Van Den Wymelenberg, and Roxana J. Hickey; 2016.11.04; Hand Hygiene in the 21st Century: Cleanliness in Context; Biology and the Built Environment Center, University of Oregon, Eugene & Portland, OR, USA. 20161104_biobe_hygiene_dyson_summary

Hartmann, E.H., Hickey, R., Hsu, Betancourt Román, C.M., Chen, J,. Schwager, R., Kline, Brown, G.Z., Halden, R.U.,Huttenhower, C., Green, J.L. 2016. Antimicrobial Chemicals Are Associated with Elevated Antibiotic Resistance Genes in the Indoor Dust Microbiome.  Environmental Science and Technology doi: 10.1021/acs.est.6b00262.

Mhuireach, G., Johnson, B.R., Altrichter, A.E., Ladau, J., Meadow, J.F., Pollard, K.S., Green, J.L.  Urban greenness influences airborne bacterial community composition.  2016.  Science of the Total Environment http://dx.doi.org/10.1016/j.scitotenv.2016.07.037.  Note:  this manuscript establishes a baseline for understanding how the indoor microbiome varies as a function of landscape design.  The lab work and data analyses are the product of an architecture student trained at the BioBE Center.

Brown, G.Z., Kline, J., Mhuireach, G., Northcutt, D., Stenson, J. 2016. Making microbiology of the built environment relevant to design. Microbiome 4:6 doi:10.1186/s40168-016-0152-7.

Adams RI, Bhangar S, Dannemiller KC, Eisen JA, Fierer N, Gilbert JA, Green JL, Marr LC, Miller SL, Siegel JA, Stephens B, Waring MS, Bibby K.  2016.  Ten questions concerning the microbiomes of buildings.  Building and Environment doi: 10.1016/j.buildenv.2016.09.001.

Blaser, M.J., Cardon, Z.G., Cho, M.K., Dangl, J.L., Donohue, T.J., Green, J.L., Knight, R.K., Maxon, M.E., Northen, T.R., Pollard, K.S., Brodie, E.L. 2016.  Toward a Predictive Understanding of Earth’s Microbiomes to Address 21st Century Challenges.  mBio 7:3e00714-1.

Alivisatos, A.P., Blaser, M.J., Brodie, E.L., Chun, M., Dangl, J.L., Donohue, T.J., Eisen, J.A., Green, J.L., Jansson, J.K., Knight, R., Maxon, M.E., McFall-Ngai, M.J., Miller, J.F., Ruby, E.J., Taha, S. 2015. A unified initiative to harness Earth’s microbiomes. Science 350 (6260): 507-508, doi:10.1126/science.aac8480.

Womack, A.M., Artaxo, P.E., Ishida, F.Y., Mueller, R.C., Saleska, S.R., Wiedemann, K.T., Bohannan, B.J.M., Green, J.L.  2015.  Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest.  Biogeosciences 12, 6337-6349.

Meadow, J.F., Altrichter, A.E., Bateman, A.C., Stenson, J., Brown, G.Z., Green, J.L., Bohannan, B.J.M. 2015. Humans differ in their personal microbial cloud. PeerJ 3:e1258 https://dx.doi.org/10.7717/peerj.1258.

Adams, R.I., Bateman, A.C., Bik, H.M., Meadow, J.F. 2015. Microbiota of the indoor environment: a meta-analysis. Microbiome 3:49 doi:10.1186/s40168-015-0108-3.

Meadow, J.F., Altrichter, A., Green, J.L. 2014. Mobile phones carry the personal microbiome of their owners. PeerJ 2:e447 http://dx.doi.org/10.7717/peerj.447.

Green, J.L. 2014. Can bioinformed design promote healthy indoor ecosystems? Indoor Air 24(2): 113-115 doi:10.1111/ina.12090.

Kembel, S.W., Meadow, J.F., O’Connor, T.K., Mhuireach, G., Northcutt, D., Kline, J., Moriyama, M., Brown, G.Z., Bohannan, B.J., Green, J.L. 2014. Architectural design drives the biogeography of indoor bacterial communities.PLoS ONE doi:10.1371/journal.pone.0087093.

Meadow, J.F., Altrichter, A., Kembel, S.W., O’Connor, T., K., Brown, G.Z. Green, J.L., Bohannan, B.J.M. 2014. Bacterial communities on classroom surfaces vary with human contact. Microbiome 2 (7). doi:10.1186/2049-2618-2-7. [featured in Microbiome Editorial “All hail reproducibility in microbiome research” doi:10.1186/2049-2618-2-8].

Meadow, J.F., Altrichter A.E., Kembel S.W., Kline J, Mhuireach G, Moriyama M, Northcutt D, O’Connor T.K., Womack A.M., Brown GZ, Green J.L., Bohannan B.J.M. 2013. Indoor airborne bacterial communities are influenced by ventilation, occupancy, and outdoor air source. Indoor Air doi:10.1111/ina.12047.

Meadow, J., Bateman, A.C., Herkert, K.M., O’Connor, T.K., Green, J.L. 2013. Significant changes in the skin microbiome mediated by the sport of roller derby. PeerJ http://dx.doi.org/10.7717/peerj.53.

Kembel, S.W., Jones, E., Kline, J., Northcutt, D., Stenson, J., Womack, A.M., Bohannan, B.J.M, Brown, G.Z., Green, J.L. 2012. Architectural design influences the diversity and structure of the built environment microbiome. International Society of Microbial Ecology (ISME) Journal doi:10.1038/ismej.2011.211.